Get trait diversity

This function calculates trait diversity per cell (sensu Leps et al 2006)

Usage

get_trait_diversity(species_list, traits = NULL)

Arguments

species_list

a list of species to include in the calculations.

traits

a vector with trait names.

Value

a matrix with site as rows and trait diversity as columns.

References

De Bello, F., Lepš, J. and Sebastià, M.-T. (2006), Variations in species and functional plant diversity along climatic and grazing gradients. Ecography, 29: 801-810. https://doi.org/10.1111/j.2006.0906-7590.04683.x

See also

vignette("h-support-functions", package = "gen3sis2")

Examples

if (FALSE) { # \dontrun{
  # mock simulation state
  space <- system.file("extdata/SouthAmerica/species_and_spaces/space_t_2.rds", package = "gen3sis2") |> readRDS()
  
  all_species <- system.file("extdata/SouthAmerica/species_and_spaces/species_t_2.rds", package = "gen3sis2") |> readRDS()
  
  data <- list(
    space = space,
    all_species = all_species
  )
  
  get_trait_diversity(data$all_species)[1:5,]
} # }